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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845192.1_cds_XP_016509261.1_22202
CDS Infomation

[gene=LOC107826747] [db_xref=GeneID:107826747] [protein=protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like isoform X2] [protein_id=XP_016509261.1] [location=complement(join(5271..5349,5449..5491,5861..6058,6156..6261,7027..7098,9318..9427,11003..11153,11234..11323,12502..12630,12789..12914,13391..13528,14266..14478,14556..14624))] [gbkey=CDS]
Sequence

ATGGTTTCTTCAACCATTCTAATTCAACAACCAACAAACTTGTTCCACCAGCCAGAGTTT
CAGCATCAGTTGTGGAGACAAGGATGTGCTGCACCGTTGCAAAAGCAACCCATTATTATA
TGTAGTAGTAACAAGGGAAGAAGCAGACCCTTGAGAGTTACTGCAAGTGCTAATGGCGCT
GCAACTTCTTCCACTCTAGAGGGTTATGATTCTTCTCCAACTCCTTCTGCATTTCCTCTT
TTTACACCCCCTTCTCAACCCCATGATACTCCTGCTTCTCAGCTGGAACTGGCAGATCCT
GATTTCTATAAAATAGGATATGTTAGAAGTTTTCGAGCCTACGGAATAGAATTCAGGGAG
GGACCGGATGGGTATGGAGTGTTTGCTTCCAGAGACGTGGAGCCTCTCCGTCGAGCTAGG
GTAATAATGGAAATTCCTCTAGAACTGATGTTAACCATAAGCAAAAAGCTTCCTTGGATG
TTTTTTCCAGATATCATACCTGTGGGACATCCAATATTCGACATTATCAATTCAACTAAT
CCTGAGACAGATTCGGATCTGAGGTTGGCATGCCTTCTTTTATATGCTTTTGATTGCAAG
GACAACTTTTGGCAGCTTTATGGAGACTTCTTACCTAGTGATGATGAATGCACTAGCTTC
CTTCTAGCCACCGAGGAGGACCTTTTGGAGTTGCAAGACGAGAAGCTTGCTTCAACTATG
AGAGAACAGCAACAACGGGCACTTGAGTTTTGGGAGAAAAATTGGCATTCTGCAGTACCC
CTCAAAATAAAGCGTCTTGCTCGGGATCCTGAGAGATTTATTTGGGCAATGTGTATAGCA
CAATCTCGAAGCATCAACTTGCAAATGAGAATTGGTGCACTGGTTCAAGATGCAAATTTG
TTGGTACCTTATGCTGATATGATGAATCATTCTTTCCAGCCAAACTGCTTTTTCCATTGG
CGCTTCAAGGACCGCATGCTGGAGGTGATGATAAATGCAGGACAAAGAATTAGAAAAGGA
GATGAGATGACTGTTGATTACATGGCTGGACAGAAGAATAATTTTTTCATGCAGAGATAT
GGTTTTTCATCACCTGTGAACCCTTGGGATGTCATTCATTTCACTGGAGATGCCAAAATT
CATCTAGACACTTTCTTATCGGTCTTTAACATATCTGGCCTCCCTGGAGAATATTACCAT
AACAGTAGGCTATCGAATGATGGAGATAGTTTTGTCGATGGAGCAATCATAGCAGCAGCA
AGAACGTTGCCTACTTGGTCAGATGGAGATCTCCCTCCAATTCCAAGTTTAGAGAGGAAA
GCAGTAAAAGAACTGCAAGAAGAATGCCACCAGATGCTTGCAGAATTCCCCACAACTTCT
GACGAAGACCAGAAAATCCTAGATTCTATGCCCGACTGCAGGAGAACACTTGAAGCAGCA
ATAAAGTATAGGTTACATAGGAAATTACTGATAGAGAAGGTTATACAGGCATTGGACATT
TACCAAGATAGGATTCTGTTCTAG

Peptide Sequence

PEP ID

XP_016509261.1
PEP Infomation

PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14-like isoform X2 [Nicotiana tabacum]
Sequence

MVSSTILIQQPTNLFHQPEFQHQLWRQGCAAPLQKQPIIICSSNKGRSRPLRVTASANGA
ATSSTLEGYDSSPTPSAFPLFTPPSQPHDTPASQLELADPDFYKIGYVRSFRAYGIEFRE
GPDGYGVFASRDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPVGHPIFDIINSTN
PETDSDLRLACLLLYAFDCKDNFWQLYGDFLPSDDECTSFLLATEEDLLELQDEKLASTM
REQQQRALEFWEKNWHSAVPLKIKRLARDPERFIWAMCIAQSRSINLQMRIGALVQDANL
LVPYADMMNHSFQPNCFFHWRFKDRMLEVMINAGQRIRKGDEMTVDYMAGQKNNFFMQRY
GFSSPVNPWDVIHFTGDAKIHLDTFLSVFNISGLPGEYYHNSRLSNDGDSFVDGAIIAAA
RTLPTWSDGDLPPIPSLERKAVKELQEECHQMLAEFPTTSDEDQKILDSMPDCRRTLEAA
IKYRLHRKLLIEKVIQALDIYQDRILF

Transcript Sequence

Gene sequence data has not been registered.